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SOD1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:236.7TPM
GTEx:86.5RPKM
FANTOM5:206.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Low
 
 
 

Antibody staining

Antibody HPA001401

  

Antibody CAB008670

  

Adipocytes

 Medium   Medium  

Fibroblasts

 Low  
      
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA001401

  

Antibody CAB008670

  

Adipocytes

 Medium   Low  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Low   Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

236.7
N/A Female, age 80 Sample 1
TPM: 270.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 248
N/A Female, age 57 Sample 3
TPM: 248.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 221
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 195.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

86.5

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 87.2
Samples: 350

Max RPKM: 182.2
Min RPKM: 49.1
Std RPKM: 18.6
Median RPKM: 84.9
GTEX-11P82-1726-SM-5Q5AT 20-29 years, male 182.2
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 181.6
GTEX-POYW-0726-SM-2XCEO 60-69 years, male 138.0
GTEX-ZQG8-1526-SM-5HL65 60-69 years, female 137.6
GTEX-YB5E-2126-SM-5IFI7 40-49 years, male 137.0
GTEX-11EM3-2326-SM-5H12B 20-29 years, female 134.4
GTEX-ZP4G-2326-SM-57WEM 20-29 years, female 133.4
GTEX-S7SF-1826-SM-3K2AD 20-29 years, female 132.7
GTEX-ZC5H-0126-SM-4WAYL 40-49 years, female 130.4
GTEX-ZLWG-2226-SM-5DUWO 50-59 years, female 130.4
Show all
Adipose - Visceral (Omentum)
RPKM: 85.6
Samples: 227

Max RPKM: 349.6
Min RPKM: 42.6
Std RPKM: 32.5
Median RPKM: 77.9
GTEX-13IVO-2426-SM-5K7V9 70-79 years, male 349.6
GTEX-13PDP-1226-SM-5K7TW 60-69 years, male 279.1
GTEX-132AR-0526-SM-5J2MJ 50-59 years, female 242.1
GTEX-131XG-0126-SM-5K7UJ 50-59 years, female 188.2
GTEX-146FH-2026-SM-5SI9I 50-59 years, female 166.8
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 165.5
GTEX-ZAJG-1626-SM-5HL7I 50-59 years, female 139.8
GTEX-139YR-0326-SM-5J1MC 50-59 years, male 133.5
GTEX-131XE-2026-SM-5LZW1 50-59 years, male 133.0
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 132.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

206.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 206.1
FF:10010-101C1 65,65,76 years, mixed 206.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.