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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:18.5TPM
GTEx:4.3RPKM
FANTOM5:55.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Not available
Chondrocytes:Medium
 

Antibody staining

Antibody HPA029754

  

Antibody CAB010363

  

Adipocytes

 Low   Medium  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Not detected  

Chondrocytes

 Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA029754

  

Antibody CAB010363

  

Adipocytes

 Not detected   Medium  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Medium   Medium  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

18.5
N/A Female, age 80 Sample 1
TPM: 13.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 19.4
N/A Female, age 57 Sample 3
TPM: 15.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 22.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 21.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

4.3

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 4.4
Samples: 350

Max RPKM: 8.0
Min RPKM: 1.6
Std RPKM: 1.1
Median RPKM: 4.2
GTEX-13111-1726-SM-5EGJZ 50-59 years, male 8.0
GTEX-QDT8-0226-SM-32PL4 30-39 years, female 8.0
GTEX-13OW6-0526-SM-5L3HY 50-59 years, male 7.9
GTEX-OOBJ-0226-SM-2YUMM 60-69 years, male 7.7
GTEX-11PRG-0626-SM-5BC56 50-59 years, male 7.5
GTEX-YECK-0226-SM-4W215 60-69 years, male 7.5
GTEX-ZDXO-2426-SM-5S2NJ 60-69 years, male 7.5
GTEX-SSA3-0226-SM-32QPN 60-69 years, male 7.4
GTEX-13FHP-0226-SM-5K7WD 50-59 years, male 7.2
GTEX-SIU8-0226-SM-2XCDS 50-59 years, male 7.1
Show all
Adipose - Visceral (Omentum)
RPKM: 4.2
Samples: 227

Max RPKM: 8.7
Min RPKM: 1.7
Std RPKM: 1.2
Median RPKM: 4.1
GTEX-UPK5-1826-SM-3GAEB 40-49 years, male 8.7
GTEX-ZT9X-0926-SM-5O9C4 40-49 years, male 8.3
GTEX-13OW7-1126-SM-5K7V6 50-59 years, male 7.7
GTEX-11PRG-1526-SM-5HL6Z 50-59 years, male 7.6
GTEX-13N11-1826-SM-5IJDS 50-59 years, female 7.3
GTEX-11NV4-1426-SM-5BC4W 60-69 years, male 6.9
GTEX-12WSI-1526-SM-5GCNM 50-59 years, male 6.9
GTEX-132AR-0526-SM-5J2MJ 50-59 years, female 6.9
GTEX-VUSG-1426-SM-3GIJN 50-59 years, male 6.9
GTEX-14A6H-1026-SM-5SIAZ 30-39 years, male 6.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

55.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 55.8
FF:10010-101C1 65,65,76 years, mixed 55.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.