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PSMA5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.6TPM
GTEx:9.6RPKM
FANTOM5:72.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA028392

  

Antibody HPA028398

  

Antibody HPA028441

  

Endothelial cells

 Not detected   Low   Low  

Glandular cells

 Medium   Medium   Medium  

Peripheral nerve/ganglion

 Low   Not detected   Not detected  
     
     
     

COLON - HPA RNA-seq

Average TPM

2.6
overview Male, age 54 Sample 1
TPM: 2.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 3.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 3.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 7.8
Samples: 149

Max RPKM: 13.5
Min RPKM: 4.1
Std RPKM: 1.6
Median RPKM: 7.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 13.5
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 12.7
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 12.3
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 12.2
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 12.1
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 11.1
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 10.9
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 10.5
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 10.4
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 10.4
Show all
Colon - Transverse
RPKM: 10.9
Samples: 196

Max RPKM: 28.3
Min RPKM: 5.3
Std RPKM: 3.3
Median RPKM: 10.3
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 28.3
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 21.2
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 20.4
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 20.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 19.6
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 18.9
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 18.6
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 18.0
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 18.0
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 17.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

72.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 72.7
FF:10014-101C5 62,83,84 years, mixed 72.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.