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PARP1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:37.9TPM
GTEx:16.8RPKM
FANTOM5:47.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA045168

  

Antibody CAB000147

  

Antibody CAB003839

  

Antibody CAB003840

  

Antibody CAB075726

  

Antibody CAB075727

  

Endothelial cells

 Medium   Not detected   Not detected   Medium   High   Medium  

Glandular cells

 High   Not detected   Not detected   Medium   High   Medium  

Peripheral nerve/ganglion

 High   Not detected   Not detected   High   Medium   Medium  
           
           
           

COLON - HPA RNA-seq

Average TPM

37.9
overview Male, age 54 Sample 1
TPM: 37.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 45.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 43.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 27
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 28.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 44.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 40.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 27.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 39.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 44.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 45.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 44
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 22.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

16.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 19.8
Samples: 149

Max RPKM: 41.1
Min RPKM: 6.6
Std RPKM: 5.9
Median RPKM: 19.1
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 41.1
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 39.4
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 37.8
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 35.8
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 33.4
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 32.9
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 32.9
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 32.7
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 32.0
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 31.3
Show all
Colon - Transverse
RPKM: 14.5
Samples: 196

Max RPKM: 25.8
Min RPKM: 2.1
Std RPKM: 4.2
Median RPKM: 13.8
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 25.8
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 25.6
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 25.1
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 24.6
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 24.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 23.8
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 23.5
GTEX-13VXT-2426-SM-5LU46 20-29 years, female 23.4
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 23.3
GTEX-PX3G-1426-SM-48U1J 20-29 years, female 22.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

47.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 47.1
FF:10014-101C5 62,83,84 years, mixed 47.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.