Fields »
ABOUT
HELP
BLOG
CDCA7

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:25.8TPM
GTEx:5.5RPKM
FANTOM5:24.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
 

Antibody staining

Antibody HPA005565

  

Endothelial cells

 Medium  

Glandular cells

 High  
 
 

COLON - HPA RNA-seq

Average TPM

25.8
overview Male, age 54 Sample 1
TPM: 21.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 27.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 14.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 11.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 22.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 55.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 33.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 17.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 43.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 30.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 26.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 14.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.5
Samples: 149

Max RPKM: 13.1
Min RPKM: 0.0
Std RPKM: 1.3
Median RPKM: 0.2
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 13.1
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 6.9
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 4.6
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 4.3
GTEX-V955-1726-SM-4JBHF 60-69 years, male 4.2
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 3.8
GTEX-XBED-1726-SM-47JYO 60-69 years, male 3.6
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 1.9
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 1.4
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 1.1
Show all
Colon - Transverse
RPKM: 9.2
Samples: 196

Max RPKM: 29.6
Min RPKM: 0.0
Std RPKM: 7.2
Median RPKM: 9.5
GTEX-1128S-1626-SM-5H12O 60-69 years, female 29.6
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 29.4
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 27.4
GTEX-Y9LG-1526-SM-4WWDR 30-39 years, male 25.7
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 25.2
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 25.1
GTEX-144GN-1126-SM-5LU33 50-59 years, male 23.6
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 23.5
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 21.9
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 21.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

24.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 24.7
FF:10014-101C5 62,83,84 years, mixed 24.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.