Tissue expression of USP53 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	7.3	TPM
GTEx:	9.6	RPKM
FANTOM5:	44.9	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

High

Antibody staining	Antibody HPA035844	Antibody HPA035845
Glandular cells	High	Low

SMALL INTESTINE - HPA RNA-seq

Average TPM	7.3

Male, age 65

Sample 1
TPM: 5.4

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 9.1

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 7.9

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 6.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	9.6

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 9.6

Samples: 88

Max RPKM: 24.3
Min RPKM: 3.1
Std RPKM: 3.4
Median RPKM: 8.9

GTEX-12WSK-1526-SM-5CVNO

40-49 years, female

24.3

GTEX-13QBU-1926-SM-5IJEW

40-49 years, female

18.4

GTEX-148VJ-2226-SM-5NQ9M

70-79 years, male

17.9

GTEX-13OVI-1926-SM-5IJCG

60-69 years, female

17.1

GTEX-ZVT2-2126-SM-5NQ93

50-59 years, female

17.0

GTEX-1399U-2126-SM-5IFEZ

50-59 years, female

16.1

GTEX-145ME-0926-SM-5O9AR

40-49 years, female

15.2

GTEX-117YX-0326-SM-5GICL

50-59 years, male

14.8

GTEX-13O21-1026-SM-5IJDU

50-59 years, male

14.6

GTEX-13O61-1326-SM-5KM31

60-69 years, male

14.4

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	44.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 44.9

FF:10024-101D6

15,40,85 years, mixed

44.9