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MDH2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:91.4TPM
GTEx:63.6RPKM
FANTOM5:346.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA019714

  

Antibody HPA019716

  

Antibody HPA019848

  

Antibody HPA026720

  

Endothelial cells

 Medium   Low   Medium   Medium  

Glandular cells

 High   High   High   High  

Peripheral nerve/ganglion

 Medium   Not detected   High   Medium  
       
       
       

COLON - HPA RNA-seq

Average TPM

91.4
overview Male, age 54 Sample 1
TPM: 88.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 76.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 81.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 105.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 45
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 105
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 103.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 89.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 83.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 130.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 109.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 99.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 70.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

63.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 52.4
Samples: 149

Max RPKM: 91.9
Min RPKM: 25.2
Std RPKM: 8.8
Median RPKM: 52.9
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 91.9
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 78.8
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 68.8
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 67.5
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 66.8
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 66.6
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 65.2
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 65.1
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 64.9
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 64.5
Show all
Colon - Transverse
RPKM: 72.0
Samples: 196

Max RPKM: 133.3
Min RPKM: 26.5
Std RPKM: 21.2
Median RPKM: 70.4
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 133.3
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 122.5
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 120.8
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 120.6
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 115.5
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 115.3
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 112.6
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 111.3
GTEX-QLQW-0426-SM-447A7 30-39 years, male 108.3
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 105.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

346.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 346.4
FF:10014-101C5 62,83,84 years, mixed 346.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.