Fields »
ABOUT
HELP
BLOG
DPH7

COLON - Expression summary

RNA expression
HPA:9.0TPM
GTEx:9.4RPKM
FANTOM5:10.2Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA022911

  

Endothelial cells

 Medium  

Glandular cells

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

9.0
overview Male, age 54 Sample 1
TPM: 5.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 6.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 6.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 5.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 10.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 9.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 10.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 11.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 11.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 9.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 13.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 10.3
Samples: 149

Max RPKM: 18.4
Min RPKM: 4.6
Std RPKM: 3.1
Median RPKM: 10.0
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 18.4
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 18.4
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 17.8
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 17.4
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 16.5
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 16.5
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 16.3
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 15.4
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 15.4
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 15.3
Show all
Colon - Transverse
RPKM: 8.8
Samples: 196

Max RPKM: 16.2
Min RPKM: 4.6
Std RPKM: 2.1
Median RPKM: 8.4
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 16.2
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 16.1
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 15.9
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 15.9
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 13.9
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 13.8
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 13.6
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 13.6
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 13.2
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 12.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

10.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 10.2
FF:10014-101C5 62,83,84 years, mixed 10.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.