Fields »
ABOUT
HELP
BLOG
A1CF

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.4TPM
GTEx:1.9RPKM
FANTOM5:42.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
 

Antibody staining

Antibody HPA037779

  

Antibody HPA044079

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Medium   Medium  
   
   

COLON - HPA RNA-seq

Average TPM

11.4
overview Male, age 54 Sample 1
TPM: 19.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 11.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 14.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 18.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 5.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 11.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 11
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 8.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 13.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 14
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 9.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 7.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.0
Samples: 149

Max RPKM: 1.3
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.0
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 1.3
GTEX-XBED-1726-SM-47JYO 60-69 years, male 1.2
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 0.9
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 0.8
GTEX-V955-1726-SM-4JBHF 60-69 years, male 0.7
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 0.6
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 0.2
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 0.2
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 0.2
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 0.2
Show all
Colon - Transverse
RPKM: 3.4
Samples: 196

Max RPKM: 10.7
Min RPKM: 0.0
Std RPKM: 2.7
Median RPKM: 3.6
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 10.7
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 10.3
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 8.7
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 8.7
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 8.1
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 8.0
GTEX-QV31-0826-SM-4R1KR 30-39 years, male 7.5
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 7.5
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 7.4
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 7.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

42.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 42.4
FF:10014-101C5 62,83,84 years, mixed 42.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.