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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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INA
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    CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

INA

Gene description

Internexin neuronal intermediate filament protein, alpha

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

2
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Tissue enhanced (testis cancer)
HPA (cell line):Cell line enhanced (NTERA-2, SCLC-21H, SH-SY5Y, SiHa)
HPA (normal tissue):Tissue enriched (cerebral cortex)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Distinct expression in the CNS and in a subset of adrenal gland cells.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data.

Reliability score

Supported based on 2 antibodies.
HPA008057 , CAB002059
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PROGNOSTIC SUMMARY

Gene product is not prognostic.
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Tissue enhanced (testis cancer)

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer

STAINING SUMMARY

HPA008057
CAB002059

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cancer tissues showed weak to moderate cytoplasmic positivity. Gliomas, urothelial cancer and several cases of melanomas displayed strong immunoreactivity.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cancer tissues were negative. A few cases of glioma showed strong immunoreactivity. One case of testicular cancer displayed strong perinuclear staining.

GENE INFORMATION

Gene name

INA (HGNC Symbol)

Synonyms

NEF5, NF-66

Description

Internexin neuronal intermediate filament protein, alpha (HGNC Symbol)

Entrez gene summary

Neurofilaments are type IV intermediate filament heteropolymers composed of light, medium, and heavy chains. Neurofilaments comprise the axoskeleton and they functionally maintain the neuronal caliber. They may also play a role in intracellular transport to axons and dendrites. This gene is a member of the intermediate filament family and is involved in the morphogenesis of neurons. [provided by RefSeq, Jun 2009]

Chromosome

10

Cytoband

q24.33

Chromosome location (bp)

103277163 - 103290351

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000148798 (version 83.38)

Entrez gene

9118

UniProt

Q16352 (UniProt - Evidence at protein level)

neXtProt

NX_Q16352

Antibodypedia

INA antibodies

PROTEIN BROWSER

INA-001
INA-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

INA-001
ENSP00000358865
ENST00000369849
Q16352 [Direct mapping]
Alpha-internexin
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005200 [structural constituent of cytoskeleton]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005654 [nucleoplasm]
GO:0005882 [intermediate filament]
GO:0005883 [neurofilament]
GO:0021762 [substantia nigra development]
GO:0030154 [cell differentiation]
GO:0031965 [nuclear membrane]
GO:0036464 [cytoplasmic ribonucleoprotein granule]
GO:0043209 [myelin sheath]
GO:0045104 [intermediate filament cytoskeleton organization]
GO:0045111 [intermediate filament cytoskeleton]
GO:0060052 [neurofilament cytoskeleton organization]
Show all
499 aa
55.4 kDa
No 0
INA-201
ENSP00000481793
ENST00000616853
A0A087WYG8 [Direct mapping]
Alpha-internexin
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005882 [intermediate filament]
GO:0005883 [neurofilament]
GO:0007399 [nervous system development]
Show all
496 aa
55.1 kDa
No 0

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