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COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:0.1TPM
GTEx:0.0RPKM
FANTOM5:0.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 
 

Antibody staining

Antibody HPA048540

  

Antibody CAB000072

  

Antibody CAB023409

  

Antibody CAB026363

  

Endothelial cells

 Not detected   Not detected   Not detected   Not detected  

Glandular cells

 Not detected   Not detected   Not detected   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected   Not detected  
          
       
       
       

COLON - HPA RNA-seq

Average TPM

0.1
overview Male, age 54 Sample 1
TPM: 0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.0
Samples: 149

Max RPKM: 2.2
Min RPKM: 0.0
Std RPKM: 0.3
Median RPKM: 0.0
GTEX-XXEK-1826-SM-4BRVC 50-59 years, male 2.2
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 1.9
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 1.8
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 1.6
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 0.5
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 0.0
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 0.0
GTEX-1122O-1426-SM-5H11R 60-69 years, female 0.0
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 0.0
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 0.0
Show all
Colon - Transverse
RPKM: 0.0
Samples: 196

Max RPKM: 2.2
Min RPKM: 0.0
Std RPKM: 0.3
Median RPKM: 0.0
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 2.2
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 2.0
GTEX-SE5C-1526-SM-4BRWU 40-49 years, female 1.9
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 1.7
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 1.7
GTEX-W5WG-2426-SM-4LMI6 50-59 years, female 1.4
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 0.7
GTEX-X3Y1-1726-SM-4PQZL 40-49 years, male 0.5
GTEX-X15G-1326-SM-4PQZJ 50-59 years, female 0.3
GTEX-XBEW-1926-SM-4SOJO 40-49 years, male 0.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.0
FF:10014-101C5 62,83,84 years, mixed 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.