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CHD1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:10.5TPM
GTEx:7.3RPKM
FANTOM5:37.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA022236

  

Glandular cells

 High  
 
 

COLON - HPA RNA-seq

Average TPM

10.5
overview Male, age 54 Sample 1
TPM: 11.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 9.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 13.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 8.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 10.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 12.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 12.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 10.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.5
Samples: 149

Max RPKM: 18.0
Min RPKM: 2.8
Std RPKM: 2.5
Median RPKM: 5.9
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 18.0
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 15.9
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 13.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 13.8
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 13.5
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 12.9
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 12.2
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 11.0
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 10.7
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 10.7
Show all
Colon - Transverse
RPKM: 7.9
Samples: 196

Max RPKM: 32.6
Min RPKM: 3.9
Std RPKM: 3.0
Median RPKM: 7.2
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 32.6
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 21.3
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 17.8
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 17.1
GTEX-144GM-1226-SM-5LU52 20-29 years, male 14.9
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 14.6
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 14.5
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 14.1
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 13.1
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 12.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

37.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 37.8
FF:10014-101C5 62,83,84 years, mixed 37.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.