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UBASH3B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.2TPM
GTEx:0.7RPKM
FANTOM5:5.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA038605

  

Antibody HPA038607

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 High   Medium  

Peripheral nerve/ganglion

 Not detected   Low  
   
   

COLON - HPA RNA-seq

Average TPM

1.2
overview Male, age 54 Sample 1
TPM: 1.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.7
Samples: 149

Max RPKM: 3.8
Min RPKM: 0.1
Std RPKM: 0.6
Median RPKM: 0.5
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 3.8
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 3.2
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 2.9
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 2.6
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 2.3
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 2.3
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 1.9
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 1.8
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 1.7
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 1.7
Show all
Colon - Transverse
RPKM: 0.7
Samples: 196

Max RPKM: 3.6
Min RPKM: 0.1
Std RPKM: 0.4
Median RPKM: 0.6
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 3.6
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 2.4
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 2.2
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 1.7
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 1.6
GTEX-QMRM-1226-SM-447C6 50-59 years, male 1.6
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 1.5
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 1.5
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 1.5
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 1.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

5.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 5.7
FF:10014-101C5 62,83,84 years, mixed 5.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.