Fields »
ABOUT
HELP
BLOG
ADAMTS1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:39.5TPM
GTEx:43.5RPKM
FANTOM5:165.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody CAB016394

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

39.5
overview Male, age 54 Sample 1
TPM: 44.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 53.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 19.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 64
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 79.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 65.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 50
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 7.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 42.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 23
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 11.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 43.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

43.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 49.8
Samples: 149

Max RPKM: 150.0
Min RPKM: 4.6
Std RPKM: 37.1
Median RPKM: 38.0
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 150.0
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 149.6
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 144.7
GTEX-YF7O-1626-SM-5IFII 50-59 years, male 144.2
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 143.9
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 141.6
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 134.9
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 133.3
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 125.1
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 122.4
Show all
Colon - Transverse
RPKM: 38.7
Samples: 196

Max RPKM: 549.4
Min RPKM: 3.7
Std RPKM: 54.9
Median RPKM: 22.2
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 549.4
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 312.6
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 243.7
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 169.2
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 163.0
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 153.1
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 146.7
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 140.3
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 138.5
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 129.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

165.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 165.2
FF:10014-101C5 62,83,84 years, mixed 165.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.