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HEATR3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:7.2TPM
GTEx:4.6RPKM
FANTOM5:14.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
 

Antibody staining

Antibody HPA041990

  

Endothelial cells

 Not detected  

Glandular cells

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

7.2
overview Male, age 54 Sample 1
TPM: 7.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 5.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 8.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 7.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 8.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 7.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 6.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.9
Samples: 149

Max RPKM: 6.9
Min RPKM: 1.8
Std RPKM: 1.0
Median RPKM: 3.9
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 6.9
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 6.8
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 6.7
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 6.5
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 6.4
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 6.4
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 6.0
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 5.9
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 5.9
GTEX-1122O-1426-SM-5H11R 60-69 years, female 5.6
Show all
Colon - Transverse
RPKM: 5.1
Samples: 196

Max RPKM: 9.5
Min RPKM: 1.9
Std RPKM: 1.5
Median RPKM: 5.0
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 9.5
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 9.4
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 8.7
GTEX-144GM-1226-SM-5LU52 20-29 years, male 8.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 8.6
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 8.4
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 8.3
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 8.2
GTEX-11I78-1226-SM-5A5K6 50-59 years, female 8.1
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 8.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

14.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 14.8
FF:10014-101C5 62,83,84 years, mixed 14.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.