Tissue expression of NIFK - Staining in adipose tissue - The Human Protein Atlas

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NIFK

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TISSUE

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CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA ADIPOSE TISSUE

GENE/PROTEIN

Antibody validation

Dictionary
	Soft tissue


Tissue proteome
	Adipose

SOFT TISSUE - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	29.9	TPM
GTEx:	15.8	RPKM
FANTOM5:	32.5	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Not detected
Chondrocytes:	Not detected
Adipocytes:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA035735		Antibody HPA035736		Antibody CAB015382		Antibody CAB075728		Antibody CAB075729
Fibroblasts	Not detected		Not detected		Not detected		Not detected		Not detected
Chondrocytes	Not detected		Not detected		Not detected
Adipocytes	Not detected
Peripheral nerve	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA035735		Antibody HPA035736		Antibody CAB015382		Antibody CAB075728		Antibody CAB075729
Adipocytes	Not detected		Low		Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected		Not detected		Not detected
Peripheral nerve	Not detected		Not detected		Not detected		Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	29.9

N/A

Female, age 80

Sample 1
TPM: 13.8

Cell types%

Adipocytes: 95
Other cell types: 5

N/A

Female, age 45

Sample 2
TPM: 14.3

N/A

Female, age 57

Sample 3
TPM: 16.1

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 74

Sample 4
TPM: 51.2

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 59

Sample 5
TPM: 54.2

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	15.8

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 14.8

Samples: 350

Max RPKM: 32.4
Min RPKM: 8.8
Std RPKM: 3.5
Median RPKM: 14.3

GTEX-T5JW-1726-SM-3GADN

20-29 years, female

32.4

GTEX-QEG5-0326-SM-2S1PB

20-29 years, male

27.0

GTEX-13O61-2426-SM-5J1NV

60-69 years, male

26.0

GTEX-XXEK-2426-SM-4BRUS

50-59 years, male

25.8

GTEX-QESD-1526-SM-2S1QT

20-29 years, male

25.7

GTEX-TKQ1-1126-SM-4GIAZ

30-39 years, male

24.6

GTEX-OIZI-0226-SM-2XCEE

40-49 years, male

23.2

GTEX-ZAJG-0226-SM-5HL81

50-59 years, female

23.1

GTEX-144GM-1926-SM-5LUAN

20-29 years, male

23.0

GTEX-ZYFD-0226-SM-5NQ86

50-59 years, male

22.8

Show all

Adipose - Visceral (Omentum)
RPKM: 17.3

Samples: 227

Max RPKM: 39.3
Min RPKM: 7.2
Std RPKM: 6.2
Median RPKM: 15.8

GTEX-13QBU-1326-SM-5LU4K

40-49 years, female

39.3

GTEX-ZA64-0926-SM-5HL7H

20-29 years, male

38.5

GTEX-11WQK-1526-SM-5EGKN

50-59 years, male

38.4

GTEX-133LE-0926-SM-5P9J1

20-29 years, female

36.3

GTEX-Y5LM-0826-SM-4VDSW

40-49 years, female

36.0

GTEX-ZTSS-1026-SM-5985N

40-49 years, male

35.7

GTEX-13JUV-0626-SM-5J1MQ

40-49 years, female

34.0

GTEX-ZLV1-0926-SM-5S2MR

60-69 years, female

33.7

GTEX-ZV7C-0826-SM-59HK8

50-59 years, male

31.2

GTEX-ZXES-0926-SM-5E43O

30-39 years, female

30.2

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	32.5

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 32.5

65,65,76 years, mixed

32.5

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.