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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:33.2TPM
GTEx:16.8RPKM
FANTOM5:29.7Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA035735

  

Antibody HPA035736

  

Antibody CAB015382

  

Antibody CAB075728

  

Antibody CAB075729

  

Squamous epithelial cells

 High   Medium   Medium   Medium   Medium  
         
         
         

ESOPHAGUS - HPA RNA-seq

Average TPM

33.2
overview Female, age 70 Sample 1
TPM: 29.7
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 36.5
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 33.5
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

16.8

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 16.8
Samples: 286

Max RPKM: 40.3
Min RPKM: 7.5
Std RPKM: 5.4
Median RPKM: 15.8
GTEX-NPJ8-1926-SM-3MJGB 40-49 years, male 40.3
GTEX-T5JW-1326-SM-4DM5G 20-29 years, female 39.2
GTEX-14BMU-0926-SM-5S2QB 20-29 years, female 38.3
GTEX-RUSQ-0826-SM-47JWW 50-59 years, male 38.2
GTEX-ZTX8-0226-SM-5E44D 20-29 years, male 32.1
GTEX-XLM4-2326-SM-4TT2D 60-69 years, male 31.7
GTEX-11TT1-0526-SM-5P9JO 20-29 years, male 30.8
GTEX-ZY6K-0626-SM-59HJL 50-59 years, male 30.0
GTEX-13O1R-1326-SM-5IJF5 60-69 years, male 29.8
GTEX-VJYA-0726-SM-4KL1T 60-69 years, male 29.6
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

29.7

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 29.7
FF:10015-101C6 68,74,75 years, mixed 29.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.