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ATAD2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:5.2TPM
GTEx:1.9RPKM
FANTOM5:22.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA029424

  

Antibody CAB056158

  

Endothelial cells

 Medium   Not detected  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

5.2
overview Male, age 54 Sample 1
TPM: 6.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 5.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 7.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 8.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 7.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.5
Samples: 149

Max RPKM: 6.2
Min RPKM: 0.5
Std RPKM: 0.7
Median RPKM: 1.3
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 6.2
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 5.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 5.2
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 3.4
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 2.7
GTEX-XBED-1726-SM-47JYO 60-69 years, male 2.7
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 2.6
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 2.6
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 2.3
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 2.3
Show all
Colon - Transverse
RPKM: 2.2
Samples: 196

Max RPKM: 6.6
Min RPKM: 0.7
Std RPKM: 0.9
Median RPKM: 2.0
GTEX-144GN-1126-SM-5LU33 50-59 years, male 6.6
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 6.5
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 5.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 5.4
GTEX-1128S-1626-SM-5H12O 60-69 years, female 5.2
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 4.7
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 4.2
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 4.1
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 3.9
GTEX-139YR-2126-SM-5KM11 50-59 years, male 3.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

22.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 22.9
FF:10014-101C5 62,83,84 years, mixed 22.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.