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CPT2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:31.7TPM
GTEx:8.6RPKM
FANTOM5:53.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA028201

  

Antibody HPA028202

  

Antibody HPA028214

  

Endothelial cells

 Not detected   Not detected   Not detected  

Glandular cells

 High   High   Medium  

Peripheral nerve/ganglion

 Medium   Medium   Not detected  
     
     
     

COLON - HPA RNA-seq

Average TPM

31.7
overview Male, age 54 Sample 1
TPM: 26.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 25.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 26.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 38
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 31.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 43.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 39.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 22.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 45.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 36.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 34.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 29.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.4
Samples: 149

Max RPKM: 6.9
Min RPKM: 1.1
Std RPKM: 1.3
Median RPKM: 3.2
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 6.9
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 6.5
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 6.4
GTEX-13111-1926-SM-5GCOL 50-59 years, male 6.3
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 6.3
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 6.2
GTEX-13QBU-2026-SM-5KLZB 40-49 years, female 6.0
GTEX-XBED-1726-SM-47JYO 60-69 years, male 6.0
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 6.0
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 5.9
Show all
Colon - Transverse
RPKM: 12.7
Samples: 196

Max RPKM: 30.1
Min RPKM: 0.3
Std RPKM: 7.4
Median RPKM: 13.7
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 30.1
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 27.6
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 27.1
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 26.8
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 26.6
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 25.0
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 24.8
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 24.6
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 23.9
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 23.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

53.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 53.2
FF:10014-101C5 62,83,84 years, mixed 53.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.