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COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:0.3TPM
GTEx:0.0RPKM
FANTOM5:47.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
 

Antibody staining

Antibody HPA006683

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

0.3
overview Male, age 54 Sample 1
TPM: 1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.0
Samples: 149

Max RPKM: 0.3
Min RPKM: 0.0
Std RPKM: 0.0
Median RPKM: 0.0
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 0.3
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 0.2
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 0.1
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 0.1
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 0.1
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 0.0
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 0.0
GTEX-1122O-1426-SM-5H11R 60-69 years, female 0.0
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 0.0
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 0.0
Show all
Colon - Transverse
RPKM: 0.0
Samples: 196

Max RPKM: 1.2
Min RPKM: 0.0
Std RPKM: 0.1
Median RPKM: 0.0
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 1.2
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 0.6
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 0.5
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 0.5
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 0.5
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 0.4
GTEX-11LCK-2026-SM-5A5MA 30-39 years, male 0.4
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 0.4
GTEX-O5YW-1426-SM-3MJHF 50-59 years, male 0.4
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 0.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

47.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 47.2
FF:10014-101C5 62,83,84 years, mixed 47.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.