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PINK1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:27.8TPM
GTEx:28.5RPKM
FANTOM5:52.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA001931

  

Antibody CAB026191

  

Endothelial cells

 Not detected   Medium  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

27.8
overview Male, age 54 Sample 1
TPM: 51.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 38.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 25.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 39.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 19.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 23.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 19.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 23.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 22.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 29.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 30.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 22.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

28.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 30.9
Samples: 149

Max RPKM: 50.0
Min RPKM: 12.4
Std RPKM: 6.1
Median RPKM: 30.7
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 50.0
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 45.5
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 44.0
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 43.9
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 43.3
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 42.7
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 42.3
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 41.8
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 41.5
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 40.4
Show all
Colon - Transverse
RPKM: 26.6
Samples: 196

Max RPKM: 46.3
Min RPKM: 10.8
Std RPKM: 6.2
Median RPKM: 26.6
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 46.3
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 42.7
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 42.3
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 42.3
GTEX-OHPM-1426-SM-3TW8Y 50-59 years, male 41.4
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 39.4
GTEX-OIZH-1426-SM-3NB1O 50-59 years, male 39.1
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 37.7
GTEX-ZPCL-1826-SM-57WF1 60-69 years, female 37.6
GTEX-S341-1426-SM-4AD6U 40-49 years, female 37.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

52.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 52.1
FF:10014-101C5 62,83,84 years, mixed 52.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.