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ATP13A2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:15.8TPM
GTEx:9.4RPKM
FANTOM5:15.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA050910

  

Antibody HPA054717

  

Antibody CAB037038

  

Antibody CAB037111

  

Endothelial cells

 Medium   Medium   Low   Medium  

Glandular cells

 High   Medium   High   Medium  

Peripheral nerve/ganglion

 Low   High   High   Medium  
       
       
       

COLON - HPA RNA-seq

Average TPM

15.8
overview Male, age 54 Sample 1
TPM: 22.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 22.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 31.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 16
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 22.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 8.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 8.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 12.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 10.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 12.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 14.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 14.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 7.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 7.2
Samples: 149

Max RPKM: 14.7
Min RPKM: 4.2
Std RPKM: 1.7
Median RPKM: 7.1
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 14.7
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 13.4
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 11.3
GTEX-V955-1726-SM-4JBHF 60-69 years, male 11.2
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 10.9
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 10.5
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 10.5
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 10.4
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 10.2
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 10.1
Show all
Colon - Transverse
RPKM: 11.1
Samples: 196

Max RPKM: 32.0
Min RPKM: 3.5
Std RPKM: 4.1
Median RPKM: 10.4
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 32.0
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 24.9
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 23.3
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 22.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 21.1
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 19.8
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 18.7
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 18.6
GTEX-QLQW-0426-SM-447A7 30-39 years, male 18.4
GTEX-144GM-1226-SM-5LU52 20-29 years, male 18.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

15.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 15.5
FF:10014-101C5 62,83,84 years, mixed 15.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.