Tissue expression of ZYX - Staining in adipose tissue - The Human Protein Atlas

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ZYX

TISSUE

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CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA ADIPOSE TISSUE

GENE/PROTEIN

Antibody validation

Dictionary
	Soft tissue


Tissue proteome
	Adipose

SOFT TISSUE - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	151.8	TPM
GTEx:	96.3	RPKM
FANTOM5:	386.2	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:	Not detected
Fibroblasts:	Not available
Adipocytes:	Not available
Peripheral nerve:	Not available

Antibody staining	Antibody HPA004835		Antibody HPA073497		Antibody CAB009321		Antibody CAB075747
Chondrocytes	Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected
Adipocytes	Not detected		Not detected
Peripheral nerve	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected
Chondrocytes:	Not available

Antibody staining	Antibody HPA004835		Antibody HPA073497		Antibody CAB009321		Antibody CAB075747
Adipocytes	Not detected		Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected		Not detected
Peripheral nerve	Not detected		Not detected		Not detected		Not detected
Chondrocytes	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	151.8

N/A

Female, age 80

Sample 1
TPM: 118.9

Cell types%

Adipocytes: 95
Other cell types: 5

N/A

Female, age 45

Sample 2
TPM: 57.5

N/A

Female, age 57

Sample 3
TPM: 52.2

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 74

Sample 4
TPM: 243

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 59

Sample 5
TPM: 287.6

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	96.3

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 98.7

Samples: 350

Max RPKM: 206.9
Min RPKM: 41.4
Std RPKM: 29.9
Median RPKM: 95.7

GTEX-14E6C-0226-SM-5S2N3

40-49 years, male

206.9

GTEX-13OW6-0526-SM-5L3HY

50-59 years, male

205.6

GTEX-111VG-2326-SM-5N9BK

60-69 years, male

192.8

GTEX-11DXW-0326-SM-5H11W

40-49 years, male

178.1

GTEX-13CF2-2626-SM-5LZZA

60-69 years, male

176.7

GTEX-11UD1-0226-SM-5EQKL

40-49 years, female

176.6

GTEX-13111-1726-SM-5EGJZ

50-59 years, male

174.8

GTEX-13N11-2626-SM-5K7UQ

50-59 years, female

174.0

GTEX-13JVG-0226-SM-5J1MW

60-69 years, male

171.3

GTEX-139YR-2426-SM-5J1OB

50-59 years, male

169.6

Show all

Adipose - Visceral (Omentum)
RPKM: 92.6

Samples: 227

Max RPKM: 183.4
Min RPKM: 33.7
Std RPKM: 26.2
Median RPKM: 89.6

GTEX-ZVZP-1126-SM-5GICU

50-59 years, male

183.4

GTEX-WOFM-0726-SM-3MJF8

20-29 years, male

172.3

GTEX-Y9LG-1226-SM-4VBQA

30-39 years, male

169.3

GTEX-11EM3-1126-SM-5A5KM

20-29 years, female

167.1

GTEX-133LE-0926-SM-5P9J1

20-29 years, female

166.7

GTEX-U8XE-1926-SM-3DB98

30-39 years, male

165.4

GTEX-13X6H-1726-SM-5Q5EH

50-59 years, female

159.6

GTEX-X8HC-2326-SM-4QAS4

50-59 years, female

156.3

GTEX-ZEX8-1226-SM-5S2OK

50-59 years, male

153.7

GTEX-13QBU-1326-SM-5LU4K

40-49 years, female

144.1

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	386.2

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 386.2

65,65,76 years, mixed

386.2

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.