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FAM189B

COLON - Expression summary

RNA expression
HPA:2.7TPM
GTEx:13.6RPKM
FANTOM5:39.4Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA006659

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

2.7
overview Male, age 54 Sample 1
TPM: 4.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

13.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 17.0
Samples: 149

Max RPKM: 26.8
Min RPKM: 9.7
Std RPKM: 3.6
Median RPKM: 16.8
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 26.8
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 26.1
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 26.0
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 25.0
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 24.9
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 24.9
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 24.7
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 23.6
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 23.3
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 23.2
Show all
Colon - Transverse
RPKM: 11.1
Samples: 196

Max RPKM: 23.1
Min RPKM: 3.2
Std RPKM: 4.2
Median RPKM: 10.7
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 23.1
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 21.9
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 21.6
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 21.2
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 20.7
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 20.7
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 20.5
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 20.3
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 20.0
GTEX-RU1J-1326-SM-46MUL 20-29 years, female 19.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

39.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 39.4
FF:10014-101C5 62,83,84 years, mixed 39.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.