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FGFR4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:12.7TPM
GTEx:7.9RPKM
FANTOM5:15.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
Endothelial cells:Not detected
Peripheral nerve/ganglion:Not detected
 
 

Antibody staining

Antibody HPA027273

  

Antibody HPA027369

  

Antibody HPA028251

  

Antibody CAB005196

  

Glandular cells

 Medium   High   Medium   Medium  

Endothelial cells

 Low   Not detected   Low  

Peripheral nerve/ganglion

 Low   Not detected  
          
       
       
       

COLON - HPA RNA-seq

Average TPM

12.7
overview Male, age 54 Sample 1
TPM: 15.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 13.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 19
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 12.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 8.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 6.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 11.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 11.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 17.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 12.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 16.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 13.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.8
Samples: 149

Max RPKM: 10.8
Min RPKM: 0.2
Std RPKM: 1.4
Median RPKM: 1.5
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 10.8
GTEX-V955-1726-SM-4JBHF 60-69 years, male 9.3
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 6.4
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 5.5
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 5.5
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 4.7
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 4.6
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 3.9
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 3.8
GTEX-XBED-1726-SM-47JYO 60-69 years, male 3.8
Show all
Colon - Transverse
RPKM: 12.5
Samples: 196

Max RPKM: 36.5
Min RPKM: 0.4
Std RPKM: 8.2
Median RPKM: 12.2
GTEX-144GN-1126-SM-5LU33 50-59 years, male 36.5
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 35.8
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 32.5
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 32.2
GTEX-QCQG-1626-SM-48U26 50-59 years, female 28.5
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 28.1
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 27.2
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 26.8
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 26.8
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 26.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

15.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 15.6
FF:10014-101C5 62,83,84 years, mixed 15.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.