Tissue expression of SYVN1 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	30.8	TPM
GTEx:	18.6	RPKM
FANTOM5:	31.3	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Chondrocytes:	Not detected
Fibroblasts:	Low
Peripheral nerve:	Low

Antibody staining	Antibody HPA005480	Antibody HPA024300	Antibody CAB037030
Adipocytes	Low	Low	Low
Chondrocytes	Not detected	Not detected	Not detected
Fibroblasts	Low	Medium	Not detected
Peripheral nerve	Low	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Fibroblasts:	Medium
Peripheral nerve:	Low

Antibody staining	Antibody HPA005480	Antibody HPA024300	Antibody CAB037030
Adipocytes	Medium	Medium	Medium
Fibroblasts	Medium	Medium	Low
Peripheral nerve	Low	Low

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	30.8

Female, age 80

Sample 1
TPM: 39.8

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 17

Female, age 57

Sample 3
TPM: 18.2

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 43.6

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 35.3

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	18.6

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 18.6

Samples: 350

Max RPKM: 43.5
Min RPKM: 6.5
Std RPKM: 3.5
Median RPKM: 18.4

GTEX-XYKS-2726-SM-4E3IC

60-69 years, female

43.5

GTEX-11EMC-2826-SM-5PNY6

60-69 years, female

31.8

GTEX-ZYWO-2526-SM-5GIDM

40-49 years, female

28.5

GTEX-POYW-0726-SM-2XCEO

60-69 years, male

28.3

GTEX-PWOO-2226-SM-2S1P1

40-49 years, female

27.4

GTEX-12696-2526-SM-5EQLN

60-69 years, male

27.3

GTEX-131XE-2426-SM-5EQ5V

50-59 years, male

27.0

GTEX-OOBK-0226-SM-2YUMF

40-49 years, male

26.8

GTEX-ZPIC-1826-SM-57WFE

40-49 years, female

26.1

GTEX-RWSA-0226-SM-2XCBA

40-49 years, male

25.7

Show all

Adipose - Visceral (Omentum)
RPKM: 18.4

Samples: 227

Max RPKM: 54.8
Min RPKM: 6.7
Std RPKM: 5.3
Median RPKM: 17.8

GTEX-ZAJG-1626-SM-5HL7I

50-59 years, female

54.8

GTEX-1339X-0726-SM-5L3FF

40-49 years, male

38.5

GTEX-13S86-0926-SM-5SI6I

40-49 years, male

36.0

GTEX-XYKS-1826-SM-4E3JV

60-69 years, female

35.9

GTEX-132AR-0526-SM-5J2MJ

50-59 years, female

35.0

GTEX-XV7Q-1726-SM-4BRUU

40-49 years, female

31.3

GTEX-12696-1826-SM-5EGJS

60-69 years, male

29.6

GTEX-ZF28-1426-SM-5S2OG

60-69 years, male

29.3

GTEX-XXEK-1426-SM-4BRW1

50-59 years, male

28.9

GTEX-13N1W-1226-SM-5K7UM

70-79 years, male

28.5

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	31.3

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 31.3

FF:10010-101C1

65,65,76 years, mixed

31.3