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IER5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.8TPM
GTEx:13.6RPKM
FANTOM5:24.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA029894

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

6.8
overview Male, age 54 Sample 1
TPM: 11.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 7.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 6.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 9.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 4.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

13.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.8
Samples: 149

Max RPKM: 46.0
Min RPKM: 3.5
Std RPKM: 6.4
Median RPKM: 7.8
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 46.0
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 36.8
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 28.2
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 28.1
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 26.7
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 26.5
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 26.2
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 24.3
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 23.3
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 22.4
Show all
Colon - Transverse
RPKM: 16.4
Samples: 196

Max RPKM: 341.1
Min RPKM: 4.8
Std RPKM: 24.2
Median RPKM: 13.8
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 341.1
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 71.5
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 43.9
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 34.7
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 33.5
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 29.6
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 27.7
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 27.3
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 25.8
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 25.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

24.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 24.7
FF:10014-101C5 62,83,84 years, mixed 24.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.