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CLDN1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.7TPM
GTEx:0.5RPKM
FANTOM5:33.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Not detected
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA048319

  

Antibody CAB002602

  

Endothelial cells

 Low   Not detected  

Glandular cells

 Not detected   High  

Peripheral nerve/ganglion

 Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

1.7
overview Male, age 54 Sample 1
TPM: 1.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.4
Samples: 149

Max RPKM: 5.7
Min RPKM: 0.0
Std RPKM: 0.5
Median RPKM: 0.2
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 5.7
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 2.6
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 2.3
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 1.7
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 1.4
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 1.3
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 1.3
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 1.1
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 1.1
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 0.9
Show all
Colon - Transverse
RPKM: 0.5
Samples: 196

Max RPKM: 5.2
Min RPKM: 0.0
Std RPKM: 0.6
Median RPKM: 0.4
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 5.2
GTEX-144GN-1126-SM-5LU33 50-59 years, male 3.3
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 3.1
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 2.6
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 2.5
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 2.5
GTEX-144GM-1226-SM-5LU52 20-29 years, male 2.2
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 1.8
GTEX-1128S-1626-SM-5H12O 60-69 years, female 1.7
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 1.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

33.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 33.6
FF:10014-101C5 62,83,84 years, mixed 33.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.