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STT3B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:58.0TPM
GTEx:22.3RPKM
FANTOM5:98.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA036448

  

Antibody HPA036646

  

Endothelial cells

 Medium   Not detected  

Glandular cells

 Medium   Low  

Peripheral nerve/ganglion

 Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

58.0
overview Male, age 54 Sample 1
TPM: 55.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 47.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 50.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 61.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 36.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 50.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 67.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 63.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 60.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 75.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 68
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 66.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 49.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

22.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 18.6
Samples: 149

Max RPKM: 26.8
Min RPKM: 11.7
Std RPKM: 2.7
Median RPKM: 18.1
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 26.8
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 26.1
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 26.1
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 25.5
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 25.3
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 24.4
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 24.0
GTEX-145LS-2926-SM-5O99G 60-69 years, female 23.4
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 23.4
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 22.9
Show all
Colon - Transverse
RPKM: 25.0
Samples: 196

Max RPKM: 41.4
Min RPKM: 12.9
Std RPKM: 5.3
Median RPKM: 24.2
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 41.4
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 41.0
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 39.4
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 38.5
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 37.9
GTEX-139YR-2126-SM-5KM11 50-59 years, male 36.8
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 36.5
GTEX-1128S-1626-SM-5H12O 60-69 years, female 36.2
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 36.2
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 35.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

98.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 98.4
FF:10014-101C5 62,83,84 years, mixed 98.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.