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ESOPHAGUS - Expression summary

RNA expression
HPA:1.6TPM
GTEx:0.8RPKM
FANTOM5:5.3Tags Per Million

ESOPHAGUS - Annotated protein expression
 

Antibody staining

Antibody HPA031365

  

Squamous epithelial cells

 High  
 
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

1.6
overview Female, age 70 Sample 1
TPM: 2.6
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 0.7
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 1.5
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

0.8

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 0.8
Samples: 286

Max RPKM: 12.5
Min RPKM: 0.0
Std RPKM: 1.1
Median RPKM: 0.6
GTEX-R55D-1126-SM-48FEB 50-59 years, male 12.5
GTEX-146FR-0426-SM-5SI97 60-69 years, female 9.9
GTEX-ZT9X-0526-SM-5GCOP 40-49 years, male 4.8
GTEX-WFJO-0826-SM-4LVM5 30-39 years, male 4.5
GTEX-XMD2-1326-SM-4YCET 60-69 years, female 4.2
GTEX-145MF-1426-SM-5O9B6 50-59 years, male 3.4
GTEX-ZAB5-0926-SM-5CVMV 50-59 years, male 3.2
GTEX-ZVE2-1326-SM-5NQ94 50-59 years, male 3.1
GTEX-13OVJ-1226-SM-5L3HA 50-59 years, female 3.0
GTEX-XGQ4-1526-SM-4AT6H 50-59 years, male 3.0
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

5.3

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 5.3
FF:10015-101C6 68,74,75 years, mixed 5.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.