Tissue expression of PRKCD - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	44.6	TPM
GTEx:	22.5	RPKM
FANTOM5:	47.3	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Chondrocytes:	Low
Peripheral nerve:	Not detected
Fibroblasts:	Low

Antibody staining	Antibody HPA001863	Antibody HPA001890	Antibody CAB010469	Antibody CAB013225
Adipocytes	Not detected	Low	Low	Medium
Chondrocytes	Low	Medium
Peripheral nerve	Not detected	Not detected
Fibroblasts	Not detected	Not detected	Medium

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Low

Antibody staining	Antibody HPA001863	Antibody HPA001890	Antibody CAB010469	Antibody CAB013225
Adipocytes	Low	Not detected	Low	Medium
Fibroblasts	Not detected	Not detected	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	44.6

Female, age 80

Sample 1
TPM: 43.3

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 42

Female, age 57

Sample 3
TPM: 42.6

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 41.5

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 53.4

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	22.5

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 23.3

Samples: 350

Max RPKM: 65.0
Min RPKM: 7.2
Std RPKM: 10.4
Median RPKM: 20.9

GTEX-13QBU-2526-SM-5LU4X

40-49 years, female

65.0

GTEX-YB5E-2126-SM-5IFI7

40-49 years, male

65.0

GTEX-11EM3-2326-SM-5H12B

20-29 years, female

64.3

GTEX-147F3-0626-SM-5NQ9I

50-59 years, female

59.3

GTEX-13NZA-0126-SM-5K7UH

60-69 years, male

57.3

GTEX-ZDTT-2626-SM-5S2OP

60-69 years, male

57.2

GTEX-P4PP-0226-SM-5S2VR

30-39 years, female

55.3

GTEX-WFG8-2326-SM-5S2UE

20-29 years, male

53.9

GTEX-ZPCL-2126-SM-57WFZ

60-69 years, female

51.5

GTEX-T6MO-1726-SM-33HB8

40-49 years, female

51.4

Show all

Adipose - Visceral (Omentum)
RPKM: 21.2

Samples: 227

Max RPKM: 65.9
Min RPKM: 5.6
Std RPKM: 12.0
Median RPKM: 17.6

GTEX-ZYFG-1426-SM-5GICS

60-69 years, female

65.9

GTEX-ZT9W-1026-SM-57WG5

50-59 years, male

64.9

GTEX-ZPCL-1026-SM-5GCOX

60-69 years, female

64.5

GTEX-11I78-0226-SM-5HL6R

50-59 years, female

60.7

GTEX-Y8LW-0926-SM-4VBQ8

50-59 years, female

60.2

GTEX-1211K-1226-SM-5EQ4N

60-69 years, female

57.6

GTEX-1122O-0926-SM-5N9C9

60-69 years, female

55.6

GTEX-ZDTT-0526-SM-5HL4M

60-69 years, male

51.2

GTEX-145LT-1526-SM-5O98P

40-49 years, male

48.7

GTEX-XAJ8-0226-SM-4GIB2

40-49 years, male

47.5

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	47.3

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 47.3

FF:10010-101C1

65,65,76 years, mixed

47.3