Tissue expression of AGGF1 - Summary - The Human Protein Atlas

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AGGF1

TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	AGGF1
Gene description	Angiogenic factor with G patch and FHA domains 1
Protein class	Disease related genes Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	2
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Estimation of protein expression could not be performed. View primary data.

DATA RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA043500
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

N/A

Caudate

N/A

N/A

Cerebellum

N/A

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

N/A

Bronchus

N/A

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

N/A

Skin

N/A

Skin

N/A

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
RNA-based expert annotation could not be performed, due to inconclusive results. View immunohistochemistry primary data.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	AGGF1 (HGNC Symbol)
Synonyms	FLJ10283, GPATC7, GPATCH7, HSU84971, VG5Q
Description	Angiogenic factor with G patch and FHA domains 1 (HGNC Symbol)
Entrez gene summary	This gene encodes an angiogenic factor that promotes proliferation of endothelial cells. Mutations in this gene are associated with a susceptibility to Klippel-Trenaunay syndrome. Pseudogenes of this gene are found on chromosomes 3, 4, 10 and 16.[provided by RefSeq, Sep 2010]
Chromosome	5
Cytoband	q13.3
Chromosome location (bp)	77029251 - 77065234
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000164252 (version 83.38)
Entrez gene	55109
UniProt	Q8N302 (UniProt - Evidence at protein level)
neXtProt	NX_Q8N302
Antibodypedia	AGGF1 antibodies

PROTEIN BROWSER

AGGF1-001	AGGF1-002

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
AGGF1-001 ENSP00000316109 ENST00000312916	Q8N302 [Direct mapping] Angiogenic factor with G patch and FHA domains 1 Show all	MEMSAT3 predicted membrane proteins Predicted intracellular proteins Disease related genes Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0001525 [angiogenesis] GO:0001570 [vasculogenesis] GO:0001938 [positive regulation of endothelial cell proliferation] GO:0003676 [nucleic acid binding] GO:0005515 [protein binding] GO:0005576 [extracellular region] GO:0005737 [cytoplasm] GO:0006396 [RNA processing] GO:0007155 [cell adhesion] GO:0045766 [positive regulation of angiogenesis] GO:0048471 [perinuclear region of cytoplasm] Show all	714 aa 81 kDa	No	0
AGGF1-002 ENSP00000424733 ENST00000506806	Q8N302 [Direct mapping] Angiogenic factor with G patch and FHA domains 1 Show all	Predicted intracellular proteins Disease related genes Protein evidence (Ezkurdia et al 2014) Show all	GO:0001525 [angiogenesis] GO:0001570 [vasculogenesis] GO:0001938 [positive regulation of endothelial cell proliferation] GO:0003676 [nucleic acid binding] GO:0005515 [protein binding] GO:0005576 [extracellular region] GO:0005737 [cytoplasm] GO:0006396 [RNA processing] GO:0007155 [cell adhesion] GO:0045766 [positive regulation of angiogenesis] GO:0048471 [perinuclear region of cytoplasm] Show all	176 aa 20.5 kDa	No	0

Contact

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.