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ABCA1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:7.8TPM
GTEx:9.8RPKM
FANTOM5:73.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
 

Antibody staining

Antibody CAB069889

  

Endothelial cells

 Low  

Glandular cells

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

7.8
overview Male, age 54 Sample 1
TPM: 5.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 12.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 5.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 8.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 11
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 10.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 6.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 12.0
Samples: 149

Max RPKM: 29.6
Min RPKM: 1.1
Std RPKM: 5.0
Median RPKM: 11.6
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 29.6
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 29.4
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 25.8
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 22.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 22.8
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 22.0
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 21.8
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 20.5
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 20.5
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 19.6
Show all
Colon - Transverse
RPKM: 8.2
Samples: 196

Max RPKM: 24.1
Min RPKM: 1.2
Std RPKM: 4.8
Median RPKM: 6.6
GTEX-S341-1426-SM-4AD6U 40-49 years, female 24.1
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 23.4
GTEX-Y114-1526-SM-4TT79 50-59 years, female 21.8
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 20.7
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 20.1
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 20.1
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 20.0
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 19.4
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 19.4
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 18.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

73.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 73.6
FF:10014-101C5 62,83,84 years, mixed 73.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.