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CLDN3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:89.6TPM
GTEx:124.6RPKM
FANTOM5:379.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA014361

  

Endothelial cells

 Not detected  

Glandular cells

 High  

Peripheral nerve/ganglion

 Not detected  
 
 

COLON - HPA RNA-seq

Average TPM

89.6
overview Male, age 54 Sample 1
TPM: 267.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 170.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 153.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 243.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 70
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 15.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 36.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 18
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 46.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 23.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 57.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 47
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

124.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.2
Samples: 149

Max RPKM: 90.4
Min RPKM: 0.0
Std RPKM: 11.8
Median RPKM: 0.2
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 90.4
GTEX-XBED-1726-SM-47JYO 60-69 years, male 74.3
GTEX-V955-1726-SM-4JBHF 60-69 years, male 59.3
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 46.1
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 39.8
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 21.5
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 15.7
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 14.5
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 11.1
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 9.7
Show all
Colon - Transverse
RPKM: 216.9
Samples: 196

Max RPKM: 847.6
Min RPKM: 0.0
Std RPKM: 182.6
Median RPKM: 221.1
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 847.6
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 611.3
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 589.0
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 583.3
GTEX-13D11-0826-SM-5KLZJ 50-59 years, female 570.1
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 560.4
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 554.4
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 551.0
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 543.9
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 519.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

379.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 379.8
FF:10014-101C5 62,83,84 years, mixed 379.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.