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NOLC1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:28.1TPM
GTEx:20.0RPKM
FANTOM5:55.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA037366

  

Antibody HPA050388

  

Antibody CAB032654

  

Endothelial cells

 Not detected   Not detected   Not detected  

Glandular cells

 Low   Not detected   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected  
     
     
     

COLON - HPA RNA-seq

Average TPM

28.1
overview Male, age 54 Sample 1
TPM: 23.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 26.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 31.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 20.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 27
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 31.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 42.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 31.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 23.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 31.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 29.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 29.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 17.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

20.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 19.9
Samples: 149

Max RPKM: 63.7
Min RPKM: 8.9
Std RPKM: 7.9
Median RPKM: 17.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 63.7
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 52.1
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 43.8
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 41.9
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 41.3
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 37.7
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 37.2
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 35.9
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 33.6
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 33.3
Show all
Colon - Transverse
RPKM: 20.0
Samples: 196

Max RPKM: 57.9
Min RPKM: 5.2
Std RPKM: 7.3
Median RPKM: 18.4
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 57.9
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 50.2
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 50.1
GTEX-144GM-1226-SM-5LU52 20-29 years, male 44.8
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 44.2
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 37.1
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 37.0
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 35.5
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 35.5
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 34.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

55.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 55.2
FF:10014-101C5 62,83,84 years, mixed 55.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.