Tissue expression of CASC4 - Staining in lung

LUNG - Expression summary

Protein expression

RNA expression

HPA:	61.8	TPM
GTEx:	12.6	RPKM
FANTOM5:	84.6	Tags Per Million

LUNG - Annotated protein expression

Annotated protein
expression

Macrophages:	Not detected
Pneumocytes:	Not detected

Antibody staining	Antibody HPA043015	Antibody HPA049488
Macrophages	Not detected	High
Pneumocytes	Not detected	High

LUNG - HPA RNA-seq

Average TPM	61.8

Female, age 71

Sample 1
TPM: 68.6

Cell types%

Pneumocytes: 40
Bronchial epithelium: 5
Endothelial cells: 25
Macrophages: 10
Other cell types: 20

Male, age 57

Sample 2
TPM: 64.9

Cell types%

Pneumocytes: 35
Bronchial epithelium: 5
Endothelial cells: 30
Macrophages: 10
Other cell types: 20

Female, age 71

Sample 3
TPM: 51.1

Cell types%

Pneumocytes: 35
Bronchial epithelium: 10
Endothelial cells: 25
Macrophages: 10
Other cell types: 20

Female, age 74

Sample 4
TPM: 66.9

Cell types%

Pneumocytes: 40
Bronchial epithelium: 0
Endothelial cells: 30
Macrophages: 15
Other cell types: 15

Female, age 73

Sample 5
TPM: 57.1

Cell types%

Pneumocytes: 30
Bronchial epithelium: 5
Endothelial cells: 30
Macrophages: 10
Other cell types: 25

Male, age 74

Sample 6
TPM: 72.2

Cell types%

Pneumocytes: 25
Bronchial epithelium: 0
Endothelial cells: 35
Macrophages: 5
Other cell types: 35

Female, age 70

Sample 7
TPM: 63.3

Cell types%

Pneumocytes: 35
Bronchial epithelium: 5
Endothelial cells: 35
Macrophages: 5
Other cell types: 20

Female, age 75

Sample 8
TPM: 61.2

Cell types%

Pneumocytes: 20
Bronchial epithelium: 10
Endothelial cells: 20
Macrophages: 10
Other cell types: 40

Male, age 63

Sample 9
TPM: 50.7

Cell types%

Pneumocytes: 25
Bronchial epithelium: 5
Endothelial cells: 25
Macrophages: 15
Other cell types: 30

LUNG - GTEx RNA-seq

Average RPKM	12.6

GTEx sample id

Sample description

RPKM

Lung
RPKM: 12.6

Samples: 320

Max RPKM: 24.5
Min RPKM: 5.4
Std RPKM: 3.0
Median RPKM: 12.1

GTEX-ZXG5-0826-SM-5GID6

60-69 years, male

24.5

GTEX-131YS-0926-SM-5IJB9

60-69 years, female

22.2

GTEX-145MH-0626-SM-5NQAK

50-59 years, male

22.0

GTEX-PVOW-1026-SM-2XCF9

40-49 years, male

21.5

GTEX-QMR6-1926-SM-32PL9

50-59 years, male

21.3

GTEX-14ABY-1126-SM-5Q5F8

50-59 years, male

20.9

GTEX-11DZ1-0426-SM-5H11A

50-59 years, male

20.7

GTEX-X585-1026-SM-46MW6

50-59 years, male

20.6

GTEX-S7SE-0926-SM-2XCD6

50-59 years, male

20.5

GTEX-Y111-1026-SM-4TT22

50-59 years, male

20.5

Show all

LUNG - FANTOM5 CAGE

Average Tags Per Million	84.6

FANTOM5 sample id

Sample description

Tags Per Million

Lung
Tags Per Million: 91.3

FF:10019-101D1

46,65,94 years, mixed

91.3

Lung - right lower lobe
Tags Per Million: 77.8

FF:10075-102A3

29 years, male

77.8