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MYO5B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:48.2TPM
GTEx:4.3RPKM
FANTOM5:136.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 
 

Antibody staining

Antibody HPA040593

  

Antibody HPA040902

  

Endothelial cells

 Medium   Medium  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Low  
      
   
   

COLON - HPA RNA-seq

Average TPM

48.2
overview Male, age 54 Sample 1
TPM: 44.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 55.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 62.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 48.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 20.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 26
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 66.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 45.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 41
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 72.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 55.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 51.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 36.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.1
Samples: 149

Max RPKM: 2.4
Min RPKM: 0.0
Std RPKM: 0.3
Median RPKM: 0.1
GTEX-XBED-1726-SM-47JYO 60-69 years, male 2.4
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 2.3
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 1.9
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 1.4
GTEX-V955-1726-SM-4JBHF 60-69 years, male 1.1
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 0.9
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 0.8
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 0.6
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 0.5
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 0.4
Show all
Colon - Transverse
RPKM: 7.4
Samples: 196

Max RPKM: 21.6
Min RPKM: 0.0
Std RPKM: 6.0
Median RPKM: 8.1
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 21.6
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 20.0
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 19.5
GTEX-R55G-1226-SM-48FDC 40-49 years, female 19.4
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 19.3
GTEX-139YR-2126-SM-5KM11 50-59 years, male 19.2
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 18.8
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 18.0
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 17.5
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 17.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

136.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 136.1
FF:10014-101C5 62,83,84 years, mixed 136.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.