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ECI1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:36.2TPM
GTEx:22.1RPKM
FANTOM5:106.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA041746

  

Antibody HPA043227

  

Endothelial cells

 Medium   Low  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

36.2
overview Male, age 54 Sample 1
TPM: 66
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 45.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 62
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 59.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 24.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 20.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 15.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 27.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 18.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 35.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 25.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 41.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 28.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

22.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 19.4
Samples: 149

Max RPKM: 40.1
Min RPKM: 9.8
Std RPKM: 3.6
Median RPKM: 19.1
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 40.1
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 29.4
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 27.2
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 27.0
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 26.7
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 26.3
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 25.7
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 25.6
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 25.2
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 24.8
Show all
Colon - Transverse
RPKM: 24.1
Samples: 196

Max RPKM: 40.2
Min RPKM: 4.5
Std RPKM: 6.2
Median RPKM: 24.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 40.2
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 40.2
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 39.5
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 37.9
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 37.1
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 35.8
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 35.3
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 35.2
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 35.1
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 35.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

106.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 106.5
FF:10014-101C5 62,83,84 years, mixed 106.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.