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SRRM2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:97.0TPM
GTEx:146.2RPKM
FANTOM5:328.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA041411

  

Endothelial cells

 High  

Peripheral nerve/ganglion

 Medium  
 

COLON - HPA RNA-seq

Average TPM

97.0
overview Male, age 54 Sample 1
TPM: 82.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 91.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 113.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 129.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 87.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 82.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 99.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 109.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 96.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 48.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 116.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 82.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 121.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

146.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 143.5
Samples: 149

Max RPKM: 346.9
Min RPKM: 46.3
Std RPKM: 41.5
Median RPKM: 139.4
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 346.9
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 238.7
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 222.7
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 221.1
GTEX-V955-1726-SM-4JBHF 60-69 years, male 215.1
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 209.8
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 209.4
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 206.9
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 203.7
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 203.0
Show all
Colon - Transverse
RPKM: 148.2
Samples: 196

Max RPKM: 232.5
Min RPKM: 58.5
Std RPKM: 33.1
Median RPKM: 149.0
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 232.5
GTEX-WH7G-1326-SM-4LVMS 40-49 years, male 230.8
GTEX-NFK9-2026-SM-3LK5K 40-49 years, male 222.2
GTEX-QEL4-1926-SM-4R1JI 50-59 years, male 220.4
GTEX-S341-1426-SM-4AD6U 40-49 years, female 219.6
GTEX-R55D-1826-SM-48FEF 50-59 years, male 217.6
GTEX-RU1J-1326-SM-46MUL 20-29 years, female 216.8
GTEX-ZTSS-1126-SM-5985O 40-49 years, male 214.6
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 209.3
GTEX-X3Y1-1726-SM-4PQZL 40-49 years, male 208.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

328.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 328.4
FF:10014-101C5 62,83,84 years, mixed 328.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.