Fields »
ABOUT
HELP
BLOG
SETD5

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:21.3TPM
GTEx:15.2RPKM
FANTOM5:25.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
Chondrocytes:Low
 

Antibody staining

Antibody HPA035574

  

Antibody CAB017093

  

Adipocytes

 Not detected   Medium  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Low   Not detected  

Chondrocytes

 Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA035574

  

Antibody CAB017093

  

Adipocytes

 Not detected   Medium  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Not detected   Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

21.3
N/A Female, age 80 Sample 1
TPM: 20
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 15.4
N/A Female, age 57 Sample 3
TPM: 17.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 25.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 27.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

15.2

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 15.4
Samples: 350

Max RPKM: 35.6
Min RPKM: 5.3
Std RPKM: 2.9
Median RPKM: 15.2
GTEX-14E6C-0226-SM-5S2N3 40-49 years, male 35.6
GTEX-14C5O-0226-SM-5SI6O 60-69 years, male 28.1
GTEX-11UD2-0126-SM-5EQL2 50-59 years, male 25.0
GTEX-XK95-0426-SM-4AT4R 40-49 years, male 24.5
GTEX-139D8-0326-SM-5IJCJ 30-39 years, female 23.5
GTEX-RTLS-0226-SM-2TF5E 60-69 years, female 23.2
GTEX-13PDP-0226-SM-5K7W9 60-69 years, male 22.9
GTEX-11TTK-0226-SM-5N9EC 60-69 years, female 22.8
GTEX-13O3P-0226-SM-5KM3Z 50-59 years, male 22.7
GTEX-POYW-0726-SM-2XCEO 60-69 years, male 22.3
Show all
Adipose - Visceral (Omentum)
RPKM: 14.9
Samples: 227

Max RPKM: 28.2
Min RPKM: 4.0
Std RPKM: 4.0
Median RPKM: 14.1
GTEX-13O3P-0926-SM-5IFFI 50-59 years, male 28.2
GTEX-X8HC-2326-SM-4QAS4 50-59 years, female 27.6
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 26.4
GTEX-113JC-0726-SM-5GZZR 50-59 years, female 24.9
GTEX-1117F-1326-SM-5EGHH 60-69 years, female 24.8
GTEX-13N1W-1226-SM-5K7UM 70-79 years, male 24.0
GTEX-132Q8-1726-SM-5EGK8 60-69 years, male 23.2
GTEX-11GS4-1026-SM-5N9DE 60-69 years, male 22.7
GTEX-139TU-1426-SM-5LZY9 60-69 years, male 22.6
GTEX-14DAQ-2526-SM-5RQIO 60-69 years, female 22.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

25.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 25.5
FF:10010-101C1 65,65,76 years, mixed 25.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.