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SETD5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:17.6TPM
GTEx:16.3RPKM
FANTOM5:27.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA035574

  

Antibody CAB017093

  

Endothelial cells

 Low   Low  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 Low   Low  
   
   
   

COLON - HPA RNA-seq

Average TPM

17.6
overview Male, age 54 Sample 1
TPM: 18.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 14.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 12.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 18.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 23.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 20.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 21.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 14.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 20.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 20.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 18.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

16.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 18.3
Samples: 149

Max RPKM: 43.8
Min RPKM: 9.2
Std RPKM: 4.9
Median RPKM: 17.4
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 43.8
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 40.2
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 31.9
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 30.8
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 30.4
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 29.1
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 27.8
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 27.5
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 25.8
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 25.7
Show all
Colon - Transverse
RPKM: 14.8
Samples: 196

Max RPKM: 44.2
Min RPKM: 6.6
Std RPKM: 4.3
Median RPKM: 13.9
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 44.2
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 31.3
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 29.7
GTEX-11GSP-1626-SM-5986N 60-69 years, female 26.6
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 26.5
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 24.6
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 24.3
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 22.7
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 21.9
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 21.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

27.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 27.9
FF:10014-101C5 62,83,84 years, mixed 27.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.