Fields »
ABOUT
HELP
BLOG
STAT3

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:124.4TPM
GTEx:56.4RPKM
FANTOM5:148.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Not available
Chondrocytes:Not available
Adipocytes:Not available
 
 
 

Antibody staining

Antibody HPA001671

  

Antibody HPA058603

  

Antibody CAB003859

  

Antibody CAB068241

  

Fibroblasts

 Medium   Medium   Medium  

Chondrocytes

 Not detected  

Adipocytes

 Medium  
          
          
       
       
       

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA001671

  

Antibody HPA058603

  

Antibody CAB003859

  

Antibody CAB068241

  

Antibody CAB068242

  

Adipocytes

 Medium   Low   High   Medium   Medium  

Fibroblasts

 High   Medium   Not detected   Medium   Medium  

Peripheral nerve

 Medium   Not detected   High   Low   Not detected  
         
         
         

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

124.4
N/A Female, age 80 Sample 1
TPM: 71.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 64
N/A Female, age 57 Sample 3
TPM: 58.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 201.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 226.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

56.4

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 54.2
Samples: 350

Max RPKM: 136.6
Min RPKM: 26.9
Std RPKM: 15.7
Median RPKM: 49.7
GTEX-REY6-0326-SM-2TF5A 60-69 years, male 136.6
GTEX-U8XE-0426-SM-3DB91 30-39 years, male 133.9
GTEX-T5JW-1726-SM-3GADN 20-29 years, female 120.4
GTEX-QESD-1526-SM-2S1QT 20-29 years, male 107.9
GTEX-OXRO-0226-SM-3LK6F 60-69 years, female 105.4
GTEX-144GM-1926-SM-5LUAN 20-29 years, male 100.9
GTEX-QEG5-0326-SM-2S1PB 20-29 years, male 96.6
GTEX-PWOO-2226-SM-2S1P1 40-49 years, female 93.4
GTEX-WI4N-1126-SM-3LK7Q 40-49 years, female 91.4
GTEX-11UD2-0126-SM-5EQL2 50-59 years, male 90.6
Show all
Adipose - Visceral (Omentum)
RPKM: 59.7
Samples: 227

Max RPKM: 114.6
Min RPKM: 24.1
Std RPKM: 18.3
Median RPKM: 56.1
GTEX-13PVQ-2226-SM-5L3G9 50-59 years, male 114.6
GTEX-ZTX8-0726-SM-59HL9 20-29 years, male 109.7
GTEX-13QBU-1326-SM-5LU4K 40-49 years, female 104.5
GTEX-Y114-1326-SM-4TT9A 50-59 years, female 103.3
GTEX-ZAJG-1626-SM-5HL7I 50-59 years, female 101.0
GTEX-ZTSS-1026-SM-5985N 40-49 years, male 96.4
GTEX-11EM3-1126-SM-5A5KM 20-29 years, female 95.9
GTEX-ZF3C-1026-SM-5S2OC 50-59 years, female 94.3
GTEX-12WSK-1026-SM-5CVNR 40-49 years, female 92.3
GTEX-ZEX8-1226-SM-5S2OK 50-59 years, male 92.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

148.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 148.1
FF:10010-101C1 65,65,76 years, mixed 148.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.