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SDC2

ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:56.5TPM
GTEx:5.2RPKM
FANTOM5:56.9Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:High
 

Antibody staining

Antibody CAB025123

  

Squamous epithelial cells

 High  
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

56.5
overview Female, age 70 Sample 1
TPM: 31.4
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 88.3
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 49.8
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

5.2

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 5.2
Samples: 286

Max RPKM: 15.5
Min RPKM: 0.7
Std RPKM: 2.9
Median RPKM: 4.7
GTEX-145LS-1826-SM-5LUAZ 60-69 years, female 15.5
GTEX-R45C-1226-SM-48FEE 60-69 years, female 15.2
GTEX-RTLS-1126-SM-46MUQ 60-69 years, female 15.2
GTEX-13O21-0626-SM-5IJDI 50-59 years, male 14.9
GTEX-11DYG-1326-SM-5N9DO 60-69 years, male 14.6
GTEX-13X6I-1026-SM-5LU4C 60-69 years, male 14.5
GTEX-11VI4-0526-SM-5EQ48 40-49 years, female 13.3
GTEX-13OVJ-1226-SM-5L3HA 50-59 years, female 13.3
GTEX-WEY5-0926-SM-4LMI4 40-49 years, female 13.0
GTEX-ZZPT-1426-SM-5N9C5 50-59 years, male 12.9
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

56.9

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 56.9
FF:10015-101C6 68,74,75 years, mixed 56.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.