Tissue expression of SDC2 - Staining in liver

LIVER - Expression summary

Protein expression

RNA expression

HPA:	240.3	TPM
GTEx:	41.5	RPKM
FANTOM5:	242.9	Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:	Medium
Hepatocytes:	Medium

Antibody staining	Antibody CAB025123
Bile duct cells	Medium
Hepatocytes	Medium

LIVER - HPA RNA-seq

Average TPM	240.3

Female, age 60

Sample 1
TPM: 236.7

Male, age 54

Sample 2
TPM: 258.3

Cell types%

Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5

Male, age 74

Sample 3
TPM: 230.1

Cell types%

Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10

Female, age 62

Sample 4
TPM: 274

Cell types%

Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20

Male, age 78

Sample 5
TPM: 171.7

Cell types%

Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20

Male, age 53

Sample 6
TPM: 258.3

Cell types%

Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15

Male, age 77

Sample 7
TPM: 186.6

Cell types%

Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20

Female, age 72

Sample 8
TPM: 172.5

Cell types%

Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40

Male, age 70

Sample 9
TPM: 207.1

Cell types%

Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25

Female, age 23

Sample 10
TPM: 408

Cell types%

Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM	41.5

GTEx sample id

Sample description

RPKM

Liver
RPKM: 41.5

Samples: 119

Max RPKM: 78.1
Min RPKM: 15.1
Std RPKM: 14.1
Median RPKM: 40.4

GTEX-13VXU-0926-SM-5IFFH

50-59 years, male

78.1

GTEX-11OF3-0726-SM-5BC4Z

60-69 years, male

75.9

GTEX-147JS-1126-SM-5RQIW

60-69 years, male

73.4

GTEX-T6MN-1226-SM-3NMA5

50-59 years, male

71.1

GTEX-14AS3-0126-SM-5Q5F4

40-49 years, female

70.5

GTEX-11WQC-0726-SM-5EQMR

60-69 years, male

67.5

GTEX-13SLX-1226-SM-5S2Q6

50-59 years, female

64.1

GTEX-YECK-1926-SM-4W21H

60-69 years, male

64.0

GTEX-R53T-0326-SM-48FEC

50-59 years, female

63.1

GTEX-ZYT6-0626-SM-5E45V

30-39 years, male

62.9

Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million	242.9

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 242.9

FF:10018-101C9

64,69,70 years, mixed

242.9