Tissue expression of SDC2 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	34.4	TPM
GTEx:	15.0	RPKM
FANTOM5:	52.9	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Medium

Antibody staining	Antibody CAB025123
Glandular cells	Medium

SMALL INTESTINE - HPA RNA-seq

Average TPM	34.4

Male, age 65

Sample 1
TPM: 22

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 34.3

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 42.4

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 38.7

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	15.0

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 15.0

Samples: 88

Max RPKM: 45.6
Min RPKM: 3.3
Std RPKM: 9.2
Median RPKM: 10.8

GTEX-ZF2S-1726-SM-57WFT

50-59 years, female

45.6

GTEX-13O21-1026-SM-5IJDU

50-59 years, male

41.9

GTEX-Y3IK-1726-SM-4YCCR

50-59 years, female

41.7

GTEX-13OVI-1926-SM-5IJCG

60-69 years, female

36.5

GTEX-1192X-2526-SM-59868

50-59 years, male

34.3

GTEX-148VJ-2226-SM-5NQ9M

70-79 years, male

32.4

GTEX-12WSK-1526-SM-5CVNO

40-49 years, female

30.3

GTEX-13111-1426-SM-5DUW3

50-59 years, male

28.2

GTEX-117YX-0326-SM-5GICL

50-59 years, male

26.6

GTEX-XMK1-1826-SM-4B66F

40-49 years, male

26.5

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	52.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 52.9

FF:10024-101D6

15,40,85 years, mixed

52.9