Tissue expression of ALCAM - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	102.5	TPM
GTEx:	13.4	RPKM
FANTOM5:	32.1	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Glandular cells:	Medium
Myoepithelial cells:	Low

Antibody staining	Antibody HPA010926	Antibody CAB002148
Adipocytes	Not detected	Not detected
Glandular cells	Medium	High
Myoepithelial cells	Not detected	High

BREAST - HPA RNA-seq

Average TPM	102.5

Female, age 52

Sample 1
TPM: 38.7

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 34.4

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 280.2

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 56.6

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	13.4

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 13.4

Samples: 214

Max RPKM: 53.7
Min RPKM: 0.2
Std RPKM: 11.8
Median RPKM: 10.7

GTEX-T5JC-2126-SM-32PMO

20-29 years, male

53.7

GTEX-ZXES-0826-SM-5E43C

30-39 years, female

51.0

GTEX-U412-1826-SM-4DXTJ

60-69 years, male

50.8

GTEX-11P7K-0726-SM-5EGKX

30-39 years, male

50.7

GTEX-ZF29-1926-SM-5S2P1

60-69 years, female

48.2

GTEX-R55F-1726-SM-2TF4R

50-59 years, male

46.0

GTEX-13OW5-2226-SM-5L3HC

60-69 years, male

41.6

GTEX-QEG5-0726-SM-4R1JQ

20-29 years, male

39.6

GTEX-111YS-1926-SM-5GICC

60-69 years, male

38.6

GTEX-145LT-0726-SM-5S2VM

40-49 years, male

38.2

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	32.1

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 32.1

FF:10080-102A8

77 years, female

32.1