Tissue expression of IRX2 - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	29.4	TPM
GTEx:	12.9	RPKM
FANTOM5:	39.1	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Glandular cells:	High
Myoepithelial cells:	Not detected

Antibody staining	Antibody HPA054669
Adipocytes	Not detected
Glandular cells	High
Myoepithelial cells	Not detected

BREAST - HPA RNA-seq

Average TPM	29.4

Female, age 52

Sample 1
TPM: 18.5

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 17.9

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 42

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 39.3

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	12.9

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 12.9

Samples: 214

Max RPKM: 54.5
Min RPKM: 0.8
Std RPKM: 10.7
Median RPKM: 10.6

GTEX-ZC5H-2626-SM-5J2MG

40-49 years, female

54.5

GTEX-12ZZX-1126-SM-5EGKB

40-49 years, female

54.3

GTEX-13PL6-2926-SM-5L3I2

40-49 years, female

44.8

GTEX-WYBS-0926-SM-3NM94

60-69 years, female

44.1

GTEX-13FTY-2226-SM-5J1ND

40-49 years, female

42.0

GTEX-11PRG-0826-SM-5EQ6A

50-59 years, male

38.1

GTEX-YFC4-1426-SM-5IFJG

40-49 years, female

35.6

GTEX-131XW-0726-SM-5EGK3

50-59 years, female

35.3

GTEX-131YS-0626-SM-5EGKL

60-69 years, female

35.3

GTEX-WYVS-1726-SM-3NMAY

40-49 years, female

33.4

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	39.1

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 39.1

FF:10080-102A8

77 years, female

39.1