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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:36.1TPM
GTEx:24.0RPKM
FANTOM5:349.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Not detected
Fibroblasts:Not detected
Adipocytes:Medium
 
 

Antibody staining

Antibody HPA031335

  

Antibody CAB004076

  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected   Not detected  

Adipocytes

 Medium  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA031335

  

Antibody CAB004076

  

Adipocytes

 Low   Medium  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Low   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

36.1
N/A Female, age 80 Sample 1
TPM: 42.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 39.3
N/A Female, age 57 Sample 3
TPM: 35.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 23.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 39
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

24.0

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 23.5
Samples: 350

Max RPKM: 69.9
Min RPKM: 8.7
Std RPKM: 9.4
Median RPKM: 20.5
GTEX-WEY5-1926-SM-3GIL8 40-49 years, female 69.9
GTEX-OHPK-0226-SM-3MJH6 50-59 years, female 54.1
GTEX-S341-1626-SM-3K2B8 40-49 years, female 53.0
GTEX-SNMC-1326-SM-2XCFK 20-29 years, male 51.1
GTEX-O5YT-0226-SM-32PK5 20-29 years, male 50.7
GTEX-ZQG8-1526-SM-5HL65 60-69 years, female 49.5
GTEX-ZC5H-0126-SM-4WAYL 40-49 years, female 48.7
GTEX-11DXX-2326-SM-5Q5A2 60-69 years, female 47.5
GTEX-T8EM-1126-SM-3DB7D 40-49 years, male 46.6
GTEX-13VXT-0226-SM-5LU9Q 20-29 years, female 46.4
Show all
Adipose - Visceral (Omentum)
RPKM: 24.8
Samples: 227

Max RPKM: 48.4
Min RPKM: 8.0
Std RPKM: 6.8
Median RPKM: 24.0
GTEX-WXYG-0926-SM-3NB2O 50-59 years, female 48.4
GTEX-XBED-1326-SM-4AT4F 60-69 years, male 46.1
GTEX-ZZ64-0626-SM-5GZWR 20-29 years, male 44.9
GTEX-WEY5-1326-SM-3GILS 40-49 years, female 42.9
GTEX-W5X1-1426-SM-3GIKH 40-49 years, female 41.6
GTEX-ZP4G-1326-SM-5EGIW 20-29 years, female 41.1
GTEX-12WSL-1126-SM-5CVNK 50-59 years, male 41.0
GTEX-13VXT-0926-SM-5LU5K 20-29 years, female 40.2
GTEX-ZQG8-1026-SM-51MR9 60-69 years, female 39.5
GTEX-X3Y1-0926-SM-3P5YT 40-49 years, male 38.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

349.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 349.7
FF:10010-101C1 65,65,76 years, mixed 349.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.