Fields »
ABOUT
HELP
BLOG
GRAMD2

COLON - Expression summary

RNA expression
HPA:2.5TPM
GTEx:0.5RPKM
FANTOM5:0.7Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA029435

  

Endothelial cells

 Low  

Glandular cells

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

2.5
overview Male, age 54 Sample 1
TPM: 1.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 4.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.2
Samples: 149

Max RPKM: 1.4
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.2
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 1.4
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 0.9
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 0.8
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 0.7
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 0.7
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 0.7
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 0.7
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 0.7
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 0.6
GTEX-145LS-2926-SM-5O99G 60-69 years, female 0.6
Show all
Colon - Transverse
RPKM: 0.8
Samples: 196

Max RPKM: 2.9
Min RPKM: 0.0
Std RPKM: 0.5
Median RPKM: 0.8
GTEX-144GM-1226-SM-5LU52 20-29 years, male 2.9
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 2.5
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 2.2
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 2.0
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 1.9
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 1.9
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 1.8
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 1.8
GTEX-14DAR-1526-SM-5RQIX 50-59 years, male 1.8
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 1.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.7
FF:10014-101C5 62,83,84 years, mixed 0.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.