Tissue expression of SFN - Staining in skin 1

SKIN - Expression summary

Protein expression

RNA expression

HPA:	1158.9	TPM
GTEx:	770.7	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Not detected
Keratinocytes:	High
Langerhans:	High
Melanocytes:	Low

Antibody staining	Antibody HPA011105	Antibody CAB006268	Antibody CAB040552
Fibroblasts	Medium	Not detected	Not detected
Keratinocytes	High	High	High
Langerhans	High	Medium	High
Melanocytes	High	Low	Low

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	High

Antibody staining	Antibody HPA011105	Antibody CAB006268	Antibody CAB040552
Epidermal cells	High	High	High

SKIN - HPA RNA-seq

Average TPM	1158.9

Female, age 34

Sample 1
TPM: 1167.4

Cell types%

Keratinocytes: 60
Other cell types: 40

Female, age 30

Sample 2
TPM: 770.6

Cell types%

Keratinocytes: 55
Other cell types: 45

Male, age 57

Sample 3
TPM: 1538.7

SKIN - GTEx RNA-seq

Average RPKM	770.7

GTEx sample id

Sample description

RPKM

Skin - Not Sun Exposed (Suprapubic)
RPKM: 828.9

Samples: 250

Max RPKM: 4423.1
Min RPKM: 221.8
Std RPKM: 485.2
Median RPKM: 709.6

GTEX-WI4N-2726-SM-3LK7Y

40-49 years, female

4423.1

GTEX-ZYFD-0626-SM-5E44E

50-59 years, male

3230.6

GTEX-11DZ1-2426-SM-5GZZX

50-59 years, male

2933.4

GTEX-WHSE-0126-SM-3NMBT

20-29 years, male

2846.1

GTEX-ZY6K-1426-SM-5GZX2

50-59 years, male

2754.8

GTEX-1399Q-2326-SM-5KM2X

40-49 years, male

1953.1

GTEX-11WQK-1026-SM-5EQLX

50-59 years, male

1887.0

GTEX-12WSK-2126-SM-5CVNC

40-49 years, female

1848.8

GTEX-131YS-2826-SM-5EQ47

60-69 years, female

1817.5

GTEX-14A5H-0826-SM-5QGPJ

60-69 years, male

1738.0

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Skin - Sun Exposed (Lower leg)
RPKM: 730.1

Samples: 357

Max RPKM: 3723.9
Min RPKM: 164.0
Std RPKM: 375.2
Median RPKM: 657.5

GTEX-ZYFD-0126-SM-5GIDL

50-59 years, male

3723.9

GTEX-WI4N-1026-SM-3LK7N

40-49 years, female

3047.1

GTEX-13OVH-0126-SM-5MR4B

70-79 years, male

2206.5

GTEX-X88G-0126-SM-47JZ3

30-39 years, male

2136.4

GTEX-P4QR-0326-SM-5SI8P

60-69 years, male

2121.0

GTEX-Y3IK-2426-SM-4WWDU

50-59 years, female

1779.6

GTEX-U8XE-0326-SM-3DB8P

30-39 years, male

1752.7

GTEX-QESD-1426-SM-2S1R9

20-29 years, male

1685.1

GTEX-132NY-0326-SM-5IJBL

60-69 years, male

1684.5

GTEX-ZVZO-0126-SM-5A5L9

40-49 years, male

1681.2

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue